nsv5692091
- Organism: Homo sapiens
- Study:nstd211 (Chuang et al. 2021)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Description:Insertion of a Alu mobile element relative to the reference
- Publication(s):Chuang et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 133 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 133 SVs from 22 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv5692091 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000007.14 | Chr7 | 20,398,382 | 20,398,382 | ||
nsv5692091 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 20,438,005 | 20,438,005 |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv17181367 | alu insertion | Sequencing | Other |
nssv17222432 | alu insertion | Sequencing | Other |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv17181367 | Submitted genomic | NC_000007.14:g.203 98382_20398383ins1 53 | GRCh38 (hg38) | NC_000007.14 | Chr7 | 20,398,382 | 20,398,382 | ||
nssv17222432 | Submitted genomic | NC_000007.14:g.203 98382_20398383ins1 53 | GRCh38 (hg38) | NC_000007.14 | Chr7 | 20,398,382 | 20,398,382 | ||
nssv17181367 | Remapped | Perfect | NC_000007.13:g.204 38005_20438006ins1 53 | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 20,438,005 | 20,438,005 |
nssv17222432 | Remapped | Perfect | NC_000007.13:g.204 38005_20438006ins1 53 | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 20,438,005 | 20,438,005 |