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dbVar

Database of genomic structural variation

nsv5695187

Organism: Homo sapiens

Study:nstd211 (Chuang et al. 2021)
Variant Type:mobile element insertion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:1

Description:Insertion of a Alu mobile element relative to the reference
Publication(s):Chuang et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 105 SVs from 21 studies. See in: genome view

Submitted genomic111,609,114-111,609,114

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5695187	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000011.10	Chr11	111,609,114	111,609,114
nsv5695187	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000011.9	Chr11	111,479,838	111,479,838

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17191576	alu insertion	Sequencing	Other
nssv17216329	alu insertion	Sequencing	Other

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17191576	Submitted genomic		NC_000011.10:g.111 609114_111609115in s280	GRCh38 (hg38)		NC_000011.10	Chr11	111,609,114	111,609,114
nssv17216329	Submitted genomic		NC_000011.10:g.111 609114_111609115in s280	GRCh38 (hg38)		NC_000011.10	Chr11	111,609,114	111,609,114
nssv17191576	Remapped	Perfect	NC_000011.9:g.1114 79838_111479839ins 280	GRCh37.p13	First Pass	NC_000011.9	Chr11	111,479,838	111,479,838
nssv17216329	Remapped	Perfect	NC_000011.9:g.1114 79838_111479839ins 280	GRCh37.p13	First Pass	NC_000011.9	Chr11	111,479,838	111,479,838

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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