nsv5716947
- Organism: Homo sapiens
- Study:nstd211 (Chuang et al. 2021)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Description:Insertion of a SVA mobile element relative to the reference
- Publication(s):Chuang et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 180 SVs from 24 studies. See in: genome view
Overlapping variant regions from other studies: 180 SVs from 24 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5716947 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000019.10 | Chr19 | 11,106,240 | 11,106,240 | ||
| nsv5716947 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000019.9 | Chr19 | 11,216,916 | 11,216,916 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv17246132 | sva insertion | Sequencing | Other |
| nssv17248827 | sva insertion | Sequencing | Other |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv17246132 | Submitted genomic | NC_000019.10:g.111 06240_11106241ins2 19 | GRCh38 (hg38) | NC_000019.10 | Chr19 | 11,106,240 | 11,106,240 | ||
| nssv17248827 | Submitted genomic | NC_000019.10:g.111 06240_11106241ins2 90 | GRCh38 (hg38) | NC_000019.10 | Chr19 | 11,106,240 | 11,106,240 | ||
| nssv17246132 | Remapped | Perfect | NC_000019.9:g.1121 6916_11216917ins21 9 | GRCh37.p13 | First Pass | NC_000019.9 | Chr19 | 11,216,916 | 11,216,916 |
| nssv17248827 | Remapped | Perfect | NC_000019.9:g.1121 6916_11216917ins29 0 | GRCh37.p13 | First Pass | NC_000019.9 | Chr19 | 11,216,916 | 11,216,916 |