nsv5829197
- Organism: Homo sapiens
- Study:nstd209 (Almarri et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,850
- Publication(s):Almarri et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 161 SVs from 28 studies. See in: genome view
Overlapping variant regions from other studies: 167 SVs from 28 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5829197 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000001.11 | Chr1 | 219,322,697 | 219,324,546 | ||
| nsv5829197 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000001.10 | Chr1 | 219,496,039 | 219,497,888 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv17461589 | copy number variation | Sequencing | Sequence alignment | 0 |
| nssv17462710 | copy number variation | Sequencing | Sequence alignment | 2 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv17461589 | Submitted genomic | GRCh38 (hg38) | NC_000001.11 | Chr1 | 219,322,697 | 219,324,546 | ||
| nssv17462710 | Submitted genomic | GRCh38 (hg38) | NC_000001.11 | Chr1 | 219,322,697 | 219,324,546 | ||
| nssv17461589 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 219,496,039 | 219,497,888 |
| nssv17462710 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 219,496,039 | 219,497,888 |