nsv5835293
- Organism: Homo sapiens
- Study:nstd209 (Almarri et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:2,187
- Publication(s):Almarri et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 199 SVs from 51 studies. See in: genome view
Overlapping variant regions from other studies: 199 SVs from 51 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5835293 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000003.12 | Chr3 | 158,397,590 | 158,399,776 | ||
| nsv5835293 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000003.11 | Chr3 | 158,115,379 | 158,117,565 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv17486481 | copy number variation | Sequencing | Sequence alignment | 2 |
| nssv17486482 | copy number variation | Sequencing | Sequence alignment | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv17486481 | Submitted genomic | GRCh38 (hg38) | NC_000003.12 | Chr3 | 158,397,590 | 158,399,776 | ||
| nssv17486482 | Submitted genomic | GRCh38 (hg38) | NC_000003.12 | Chr3 | 158,397,590 | 158,399,776 | ||
| nssv17486481 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000003.11 | Chr3 | 158,115,379 | 158,117,565 |
| nssv17486482 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000003.11 | Chr3 | 158,115,379 | 158,117,565 |