nsv5865078
- Organism: Homo sapiens
- Study:nstd209 (Almarri et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,802
- Publication(s):Almarri et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 131 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 121 SVs from 30 studies. See in: genome view
Overlapping variant regions from other studies: 6 SVs from 5 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5865078 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000012.12 | Chr12 | 121,353,053 | 121,354,854 | ||
| nsv5865078 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | Second Pass | NC_000012.11 | Chr12 | 121,790,856 | 121,792,657 |
| nsv5865078 | Remapped | Perfect | GRCh37.p13 | PATCHES | First Pass | NW_004504303.2 | Chr12|NW_0 04504303.2 | 29,056 | 30,857 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv17467608 | copy number variation | Sequencing | Sequence alignment | 0 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv17467608 | Submitted genomic | GRCh38 (hg38) | NC_000012.12 | Chr12 | 121,353,053 | 121,354,854 | ||
| nssv17467608 | Remapped | Perfect | GRCh37.p13 | First Pass | NW_004504303.2 | Chr12|NW_0 04504303.2 | 29,056 | 30,857 |
| nssv17467608 | Remapped | Perfect | GRCh37.p13 | Second Pass | NC_000012.11 | Chr12 | 121,790,856 | 121,792,657 |