nsv5866475
- Organism: Homo sapiens
- Study:nstd209 (Almarri et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:3
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,648
- Publication(s):Almarri et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 238 SVs from 40 studies. See in: genome view
Overlapping variant regions from other studies: 238 SVs from 40 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5866475 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000011.10 | Chr11 | 1,245,474 | 1,247,121 | ||
| nsv5866475 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 1,266,704 | 1,268,351 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv17453642 | copy number variation | Sequencing | Sequence alignment | 3 |
| nssv17457088 | copy number variation | Sequencing | Sequence alignment | 2 |
| nssv17468664 | copy number variation | Sequencing | Sequence alignment | 0 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv17453642 | Submitted genomic | GRCh38 (hg38) | NC_000011.10 | Chr11 | 1,245,474 | 1,247,121 | ||
| nssv17457088 | Submitted genomic | GRCh38 (hg38) | NC_000011.10 | Chr11 | 1,245,474 | 1,247,121 | ||
| nssv17468664 | Submitted genomic | GRCh38 (hg38) | NC_000011.10 | Chr11 | 1,245,474 | 1,247,121 | ||
| nssv17453642 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 1,266,704 | 1,268,351 |
| nssv17457088 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 1,266,704 | 1,268,351 |
| nssv17468664 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 1,266,704 | 1,268,351 |