nsv5869526
- Organism: Homo sapiens
- Study:nstd209 (Almarri et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:100
- Publication(s):Almarri et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 108 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 108 SVs from 22 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv5869526 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000001.11 | Chr1 | 92,914,901 | 92,915,000 | ||
nsv5869526 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000001.10 | Chr1 | 93,380,458 | 93,380,557 |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv17396386 | duplication | Sequencing | Sequence alignment |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv17396386 | Submitted genomic | NC_000001.11:g.929 14901_92915000dup | GRCh38 (hg38) | NC_000001.11 | Chr1 | 92,914,901 | 92,915,000 | ||
nssv17396386 | Remapped | Perfect | NC_000001.10:g.933 80458_93380557dup | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 93,380,458 | 93,380,557 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.
Genotype Information
Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
---|---|---|---|
nssv17396386 | 1 | 2 | 2 |