nsv5871542
- Organism: Homo sapiens
- Study:nstd209 (Almarri et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:8,882
- Publication(s):Almarri et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 196 SVs from 28 studies. See in: genome view
Overlapping variant regions from other studies: 196 SVs from 28 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv5871542 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000017.11 | Chr17 | 59,585,885 | 59,594,766 | ||
nsv5871542 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000017.10 | Chr17 | 57,663,246 | 57,672,127 |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Copy number |
---|---|---|---|---|
nssv17475190 | copy number variation | Sequencing | Sequence alignment | 0 |
nssv17475191 | copy number variation | Sequencing | Sequence alignment | 2 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|
nssv17475190 | Submitted genomic | GRCh38 (hg38) | NC_000017.11 | Chr17 | 59,585,885 | 59,594,766 | ||
nssv17475191 | Submitted genomic | GRCh38 (hg38) | NC_000017.11 | Chr17 | 59,585,885 | 59,594,766 | ||
nssv17475190 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000017.10 | Chr17 | 57,663,246 | 57,672,127 |
nssv17475191 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000017.10 | Chr17 | 57,663,246 | 57,672,127 |