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dbVar

Database of genomic structural variation

nsv5872978

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:6
Validation:Not tested
Clinical Assertions: No
Region Size:16,075

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 352 SVs from 64 studies. See in: genome view

Submitted genomic72,060,816-72,076,890

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5872978	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000016.10	Chr16	72,060,816	72,076,890
nsv5872978	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000016.9	Chr16	72,094,715	72,110,789

Variant Call Information

Variant Call ID	Type	Method	Analysis	Copy number
nssv17472745	copy number variation	Sequencing	Sequence alignment	2
nssv17472746	copy number variation	Sequencing	Sequence alignment	3
nssv17472747	copy number variation	Sequencing	Sequence alignment	4
nssv17472748	copy number variation	Sequencing	Sequence alignment	5
nssv17472749	copy number variation	Sequencing	Sequence alignment	6
nssv17479099	copy number variation	Sequencing	Sequence alignment	0

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17472745	Submitted genomic		GRCh38 (hg38)		NC_000016.10	Chr16	72,060,816	72,076,890
nssv17472746	Submitted genomic		GRCh38 (hg38)		NC_000016.10	Chr16	72,060,816	72,076,890
nssv17472747	Submitted genomic		GRCh38 (hg38)		NC_000016.10	Chr16	72,060,816	72,076,890
nssv17472748	Submitted genomic		GRCh38 (hg38)		NC_000016.10	Chr16	72,060,816	72,076,890
nssv17472749	Submitted genomic		GRCh38 (hg38)		NC_000016.10	Chr16	72,060,816	72,076,890
nssv17479099	Submitted genomic		GRCh38 (hg38)		NC_000016.10	Chr16	72,060,816	72,076,890
nssv17472745	Remapped	Perfect	GRCh37.p13	First Pass	NC_000016.9	Chr16	72,094,715	72,110,789
nssv17472746	Remapped	Perfect	GRCh37.p13	First Pass	NC_000016.9	Chr16	72,094,715	72,110,789
nssv17472747	Remapped	Perfect	GRCh37.p13	First Pass	NC_000016.9	Chr16	72,094,715	72,110,789
nssv17472748	Remapped	Perfect	GRCh37.p13	First Pass	NC_000016.9	Chr16	72,094,715	72,110,789
nssv17472749	Remapped	Perfect	GRCh37.p13	First Pass	NC_000016.9	Chr16	72,094,715	72,110,789
nssv17479099	Remapped	Perfect	GRCh37.p13	First Pass	NC_000016.9	Chr16	72,094,715	72,110,789

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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