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dbVar

Database of genomic structural variation

nsv5875288

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:709

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 237 SVs from 54 studies. See in: genome view

Submitted genomic95,860,949-95,861,657

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5875288	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000002.12	Chr2	95,860,949	95,861,657
nsv5875288	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000002.11	Chr2	96,526,697	96,527,405

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17408341	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17408341	Submitted genomic		NC_000002.12:g.958 60949_95861657del	GRCh38 (hg38)		NC_000002.12	Chr2	95,860,949	95,861,657
nssv17408341	Remapped	Perfect	NC_000002.11:g.965 26697_96527405del	GRCh37.p13	First Pass	NC_000002.11	Chr2	96,526,697	96,527,405

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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