nsv5878433
- Organism: Homo sapiens
- Study:nstd209 (Almarri et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:4,466
- Publication(s):Almarri et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 212 SVs from 46 studies. See in: genome view
Overlapping variant regions from other studies: 212 SVs from 46 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv5878433 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000001.11 | Chr1 | 190,340,808 | 190,345,273 | ||
nsv5878433 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000001.10 | Chr1 | 190,309,938 | 190,314,403 |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv17350217 | deletion | Sequencing | Sequence alignment |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv17350217 | Submitted genomic | NC_000001.11:g.190 340808_190345273de l | GRCh38 (hg38) | NC_000001.11 | Chr1 | 190,340,808 | 190,345,273 | ||
nssv17350217 | Remapped | Perfect | NC_000001.10:g.190 309938_190314403de l | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 190,309,938 | 190,314,403 |