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dbVar

Database of genomic structural variation

nsv5880035

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1,026

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 133 SVs from 24 studies. See in: genome view

Submitted genomic66,307,137-66,308,162

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5880035	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000001.11	Chr1	66,307,137	66,308,162
nsv5880035	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000001.10	Chr1	66,772,820	66,773,845

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17375734	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17375734	Submitted genomic		NC_000001.11:g.663 07137_66308162del	GRCh38 (hg38)		NC_000001.11	Chr1	66,307,137	66,308,162
nssv17375734	Remapped	Perfect	NC_000001.10:g.667 72820_66773845del	GRCh37.p13	First Pass	NC_000001.10	Chr1	66,772,820	66,773,845

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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