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dbVar

Database of genomic structural variation

nsv5880642

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:4,078

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 117 SVs from 25 studies. See in: genome view

Submitted genomic92,891,924-92,896,001

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5880642	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000001.11	Chr1	92,891,924	92,896,001
nsv5880642	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000001.10	Chr1	93,357,481	93,361,558

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17396283	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17396283	Submitted genomic		NC_000001.11:g.928 91924_92896001del	GRCh38 (hg38)		NC_000001.11	Chr1	92,891,924	92,896,001
nssv17396283	Remapped	Perfect	NC_000001.10:g.933 57481_93361558del	GRCh37.p13	First Pass	NC_000001.10	Chr1	93,357,481	93,361,558

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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