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dbVar

Database of genomic structural variation

nsv5883072

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:340

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 219 SVs from 41 studies. See in: genome view

Submitted genomic46,039,366-46,039,705

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5883072	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000001.11	Chr1	46,039,366	46,039,705
nsv5883072	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000001.10	Chr1	46,505,038	46,505,377

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17375181	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17375181	Submitted genomic		NC_000001.11:g.460 39366_46039705del	GRCh38 (hg38)		NC_000001.11	Chr1	46,039,366	46,039,705
nssv17375181	Remapped	Perfect	NC_000001.10:g.465 05038_46505377del	GRCh37.p13	First Pass	NC_000001.10	Chr1	46,505,038	46,505,377

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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