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dbVar

Database of genomic structural variation

nsv5885954

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1,879

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 354 SVs from 57 studies. See in: genome view

Submitted genomic95,919,505-95,921,383

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5885954	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000002.12	Chr2	95,919,505	95,921,383
nsv5885954	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000002.11	Chr2	96,585,253	96,587,131

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17393736	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17393736	Submitted genomic		NC_000002.12:g.959 19505_95921383del	GRCh38 (hg38)		NC_000002.12	Chr2	95,919,505	95,921,383
nssv17393736	Remapped	Perfect	NC_000002.11:g.965 85253_96587131del	GRCh37.p13	First Pass	NC_000002.11	Chr2	96,585,253	96,587,131

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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