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dbVar

Database of genomic structural variation

nsv5886016

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:2,084

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 186 SVs from 27 studies. See in: genome view

Submitted genomic59,585,884-59,587,967

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5886016	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000017.11	Chr17	59,585,884	59,587,967
nsv5886016	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000017.10	Chr17	57,663,245	57,665,328

Variant Call Information

Variant Call ID	Type	Method	Analysis	Copy number
nssv17475188	copy number variation	Sequencing	Sequence alignment	0
nssv17475189	copy number variation	Sequencing	Sequence alignment	2

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17475188	Submitted genomic		GRCh38 (hg38)		NC_000017.11	Chr17	59,585,884	59,587,967
nssv17475189	Submitted genomic		GRCh38 (hg38)		NC_000017.11	Chr17	59,585,884	59,587,967
nssv17475188	Remapped	Perfect	GRCh37.p13	First Pass	NC_000017.10	Chr17	57,663,245	57,665,328
nssv17475189	Remapped	Perfect	GRCh37.p13	First Pass	NC_000017.10	Chr17	57,663,245	57,665,328

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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