nsv5887141
- Organism: Homo sapiens
- Study:nstd209 (Almarri et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,772
- Publication(s):Almarri et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 172 SVs from 35 studies. See in: genome view
Overlapping variant regions from other studies: 11 SVs from 3 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5887141 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000020.11 | Chr20 | 29,449,267 | 29,451,038 | ||
| nsv5887141 | Remapped | Good | GRCh37.p13 | Primary Assembly | Second Pass | NT_167213.1 | Unplaced|N T_167213.1 | 46,146 | 47,898 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv17484537 | copy number variation | Sequencing | Sequence alignment | 0 |
| nssv17484538 | copy number variation | Sequencing | Sequence alignment | 2 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv17484537 | Submitted genomic | GRCh38 (hg38) | NC_000020.11 | Chr20 | 29,449,267 | 29,451,038 | ||
| nssv17484538 | Submitted genomic | GRCh38 (hg38) | NC_000020.11 | Chr20 | 29,449,267 | 29,451,038 | ||
| nssv17484537 | Remapped | Good | GRCh37.p13 | Second Pass | NT_167213.1 | Unplaced|N T_167213.1 | 46,146 | 47,898 |
| nssv17484538 | Remapped | Good | GRCh37.p13 | Second Pass | NT_167213.1 | Unplaced|N T_167213.1 | 46,146 | 47,898 |