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dbVar

Database of genomic structural variation

nsv5887329

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:112,113

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 539 SVs from 50 studies. See in: genome view

Submitted genomic109,546,850-109,658,962

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5887329	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000023.11	ChrX	109,546,850	109,658,962
nsv5887329	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000023.10	ChrX	108,790,079	108,902,191

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17439047	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17439047	Submitted genomic		NC_000023.11:g.109 546850_109658962de l	GRCh38 (hg38)		NC_000023.11	ChrX	109,546,850	109,658,962
nssv17439047	Remapped	Perfect	NC_000023.10:g.108 790079_108902191de l	GRCh37.p13	First Pass	NC_000023.10	ChrX	108,790,079	108,902,191

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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