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dbVar

Database of genomic structural variation

nsv5888468

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:68

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 130 SVs from 23 studies. See in: genome view

Submitted genomic171,688,028-171,688,095

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5888468	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000003.12	Chr3	171,688,028	171,688,095
nsv5888468	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000003.11	Chr3	171,405,818	171,405,885

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17412674	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17412674	Submitted genomic		NC_000003.12:g.171 688028_171688095de l	GRCh38 (hg38)		NC_000003.12	Chr3	171,688,028	171,688,095
nssv17412674	Remapped	Perfect	NC_000003.11:g.171 405818_171405885de l	GRCh37.p13	First Pass	NC_000003.11	Chr3	171,405,818	171,405,885

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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