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dbVar

Database of genomic structural variation

nsv5888777

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:65

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 139 SVs from 21 studies. See in: genome view

Submitted genomic168,551,519-168,551,583

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5888777	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000002.12	Chr2	168,551,519	168,551,583
nsv5888777	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000002.11	Chr2	169,408,029	169,408,093

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17404672	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17404672	Submitted genomic		NC_000002.12:g.168 551519_168551583de l	GRCh38 (hg38)		NC_000002.12	Chr2	168,551,519	168,551,583
nssv17404672	Remapped	Perfect	NC_000002.11:g.169 408029_169408093de l	GRCh37.p13	First Pass	NC_000002.11	Chr2	169,408,029	169,408,093

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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