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dbVar

Database of genomic structural variation

nsv5889464

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:313

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 177 SVs from 41 studies. See in: genome view

Submitted genomic141,005,774-141,006,086

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5889464	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000004.12	Chr4	141,005,774	141,006,086
nsv5889464	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000004.11	Chr4	141,926,928	141,927,240

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17415152	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17415152	Submitted genomic		NC_000004.12:g.141 005774_141006086de l	GRCh38 (hg38)		NC_000004.12	Chr4	141,005,774	141,006,086
nssv17415152	Remapped	Perfect	NC_000004.11:g.141 926928_141927240de l	GRCh37.p13	First Pass	NC_000004.11	Chr4	141,926,928	141,927,240

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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