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dbVar

Database of genomic structural variation

nsv5890078

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:20,853

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 108 SVs from 23 studies. See in: genome view

Submitted genomic137,360,174-137,381,026

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5890078	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	137,360,174	137,381,026
nsv5890078	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	136,695,863	136,716,715

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17416879	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17416879	Submitted genomic		NC_000005.10:g.137 360174_137381026de l	GRCh38 (hg38)		NC_000005.10	Chr5	137,360,174	137,381,026
nssv17416879	Remapped	Perfect	NC_000005.9:g.1366 95863_136716715del	GRCh37.p13	First Pass	NC_000005.9	Chr5	136,695,863	136,716,715

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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