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dbVar

Database of genomic structural variation

nsv5890155

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1,558

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 134 SVs from 40 studies. See in: genome view

Submitted genomic49,955,118-49,956,675

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5890155	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000003.12	Chr3	49,955,118	49,956,675
nsv5890155	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000003.11	Chr3	49,992,551	49,994,108

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17415070	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17415070	Submitted genomic		NC_000003.12:g.499 55118_49956675del	GRCh38 (hg38)		NC_000003.12	Chr3	49,955,118	49,956,675
nssv17415070	Remapped	Perfect	NC_000003.11:g.499 92551_49994108del	GRCh37.p13	First Pass	NC_000003.11	Chr3	49,992,551	49,994,108

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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