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dbVar

Database of genomic structural variation

nsv5892020

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:5,106

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 103 SVs from 23 studies. See in: genome view

Submitted genomic142,208,920-142,214,025

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5892020	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000006.12	Chr6	142,208,920	142,214,025
nsv5892020	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000006.11	Chr6	142,530,057	142,535,162

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17422649	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17422649	Submitted genomic		NC_000006.12:g.142 208920_142214025de l	GRCh38 (hg38)		NC_000006.12	Chr6	142,208,920	142,214,025
nssv17422649	Remapped	Perfect	NC_000006.11:g.142 530057_142535162de l	GRCh37.p13	First Pass	NC_000006.11	Chr6	142,530,057	142,535,162

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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