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dbVar

Database of genomic structural variation

nsv5892338

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:64

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 83 SVs from 17 studies. See in: genome view

Submitted genomic169,947,790-169,947,853

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5892338	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	169,947,790	169,947,853
nsv5892338	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	169,374,794	169,374,857

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17412301	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17412301	Submitted genomic		NC_000005.10:g.169 947790_169947853de l	GRCh38 (hg38)		NC_000005.10	Chr5	169,947,790	169,947,853
nssv17412301	Remapped	Perfect	NC_000005.9:g.1693 74794_169374857del	GRCh37.p13	First Pass	NC_000005.9	Chr5	169,374,794	169,374,857

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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