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dbVar

Database of genomic structural variation

nsv5893108

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:130

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 193 SVs from 30 studies. See in: genome view

Submitted genomic169,535,375-169,535,504

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5893108	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000002.12	Chr2	169,535,375	169,535,504
nsv5893108	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000002.11	Chr2	170,391,885	170,392,014

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17397807	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17397807	Submitted genomic		NC_000002.12:g.169 535375_169535504de l	GRCh38 (hg38)		NC_000002.12	Chr2	169,535,375	169,535,504
nssv17397807	Remapped	Perfect	NC_000002.11:g.170 391885_170392014de l	GRCh37.p13	First Pass	NC_000002.11	Chr2	170,391,885	170,392,014

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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