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dbVar

Database of genomic structural variation

nsv5894010

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:61

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 158 SVs from 35 studies. See in: genome view

Submitted genomic168,547,483-168,547,543

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5894010	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000002.12	Chr2	168,547,483	168,547,543
nsv5894010	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000002.11	Chr2	169,403,993	169,404,053

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17398855	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17398855	Submitted genomic		NC_000002.12:g.168 547483_168547543de l	GRCh38 (hg38)		NC_000002.12	Chr2	168,547,483	168,547,543
nssv17398855	Remapped	Perfect	NC_000002.11:g.169 403993_169404053de l	GRCh37.p13	First Pass	NC_000002.11	Chr2	169,403,993	169,404,053

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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