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dbVar

Database of genomic structural variation

nsv5896854

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:3,696

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 103 SVs from 30 studies. See in: genome view

Submitted genomic173,609,432-173,613,127

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5896854	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	173,609,432	173,613,127
nsv5896854	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	173,036,435	173,040,130

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17425428	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17425428	Submitted genomic		NC_000005.10:g.173 609432_173613127de l	GRCh38 (hg38)		NC_000005.10	Chr5	173,609,432	173,613,127
nssv17425428	Remapped	Perfect	NC_000005.9:g.1730 36435_173040130del	GRCh37.p13	First Pass	NC_000005.9	Chr5	173,036,435	173,040,130

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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