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dbVar

Database of genomic structural variation

nsv5898510

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:3,368

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 176 SVs from 27 studies. See in: genome view

Submitted genomic111,399,227-111,402,594

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5898510	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	111,399,227	111,402,594
nsv5898510	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	110,734,925	110,738,292

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17411270	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17411270	Submitted genomic		NC_000005.10:g.111 399227_111402594de l	GRCh38 (hg38)		NC_000005.10	Chr5	111,399,227	111,402,594
nssv17411270	Remapped	Perfect	NC_000005.9:g.1107 34925_110738292del	GRCh37.p13	First Pass	NC_000005.9	Chr5	110,734,925	110,738,292

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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