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dbVar

Database of genomic structural variation

nsv5898662

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:189

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 88 SVs from 19 studies. See in: genome view

Submitted genomic140,421,593-140,421,781

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5898662	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	140,421,593	140,421,781
nsv5898662	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	139,801,178	139,801,366

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17429406	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17429406	Submitted genomic		NC_000005.10:g.140 421593_140421781de l	GRCh38 (hg38)		NC_000005.10	Chr5	140,421,593	140,421,781
nssv17429406	Remapped	Perfect	NC_000005.9:g.1398 01178_139801366del	GRCh37.p13	First Pass	NC_000005.9	Chr5	139,801,178	139,801,366

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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