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dbVar

Database of genomic structural variation

nsv5904119

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1,293

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 136 SVs from 30 studies. See in: genome view

Submitted genomic102,010,608-102,011,900

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5904119	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000004.12	Chr4	102,010,608	102,011,900
nsv5904119	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000004.11	Chr4	102,931,765	102,933,057

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17420419	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17420419	Submitted genomic		NC_000004.12:g.102 010608_102011900de l	GRCh38 (hg38)		NC_000004.12	Chr4	102,010,608	102,011,900
nssv17420419	Remapped	Perfect	NC_000004.11:g.102 931765_102933057de l	GRCh37.p13	First Pass	NC_000004.11	Chr4	102,931,765	102,933,057

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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