Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv5906105

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:312

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 200 SVs from 53 studies. See in: genome view

Submitted genomic168,538,952-168,539,263

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5906105	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000002.12	Chr2	168,538,952	168,539,263
nsv5906105	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000002.11	Chr2	169,395,462	169,395,773

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17394790	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17394790	Submitted genomic		NC_000002.12:g.168 538952_168539263de l	GRCh38 (hg38)		NC_000002.12	Chr2	168,538,952	168,539,263
nssv17394790	Remapped	Perfect	NC_000002.11:g.169 395462_169395773de l	GRCh37.p13	First Pass	NC_000002.11	Chr2	169,395,462	169,395,773

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

You are here: NCBI