Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv5906880

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:3,364

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 173 SVs from 47 studies. See in: genome view

Submitted genomic118,322,558-118,325,921

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5906880	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000004.12	Chr4	118,322,558	118,325,921
nsv5906880	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000004.11	Chr4	119,243,713	119,247,076

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17419512	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17419512	Submitted genomic		NC_000004.12:g.118 322558_118325921de l	GRCh38 (hg38)		NC_000004.12	Chr4	118,322,558	118,325,921
nssv17419512	Remapped	Perfect	NC_000004.11:g.119 243713_119247076de l	GRCh37.p13	First Pass	NC_000004.11	Chr4	119,243,713	119,247,076

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

You are here: NCBI