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dbVar

Database of genomic structural variation

nsv5907258

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:5,518,149

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 15933 SVs from 127 studies. See in: genome view

Submitted genomic87,165,110-92,683,258

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5907258	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000004.12	Chr4	87,165,110	92,683,258
nsv5907258	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000004.11	Chr4	88,086,262	93,604,409

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17428894	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17428894	Submitted genomic		NC_000004.12:g.871 65110_92683258del	GRCh38 (hg38)		NC_000004.12	Chr4	87,165,110	92,683,258
nssv17428894	Remapped	Perfect	NC_000004.11:g.880 86262_93604409del	GRCh37.p13	First Pass	NC_000004.11	Chr4	88,086,262	93,604,409

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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