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dbVar

Database of genomic structural variation

nsv5911000

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:6,978

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 97 SVs from 24 studies. See in: genome view

Submitted genomic18,225,187-18,232,164

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5911000	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000010.11	Chr10	18,225,187	18,232,164
nsv5911000	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000010.10	Chr10	18,514,116	18,521,093

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17351315	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17351315	Submitted genomic		NC_000010.11:g.182 25187_18232164del	GRCh38 (hg38)		NC_000010.11	Chr10	18,225,187	18,232,164
nssv17351315	Remapped	Perfect	NC_000010.10:g.185 14116_18521093del	GRCh37.p13	First Pass	NC_000010.10	Chr10	18,514,116	18,521,093

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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