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dbVar

Database of genomic structural variation

nsv5922185

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:65

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 187 SVs from 31 studies. See in: genome view

Submitted genomic133,220,597-133,220,661

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5922185	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000009.12	Chr9	133,220,597	133,220,661
nsv5922185	Remapped	Perfect	GRCh37.p13	Primary Assembly	Second Pass	NC_000009.11	Chr9	136,095,984	136,096,048
nsv5922185	Remapped	Perfect	GRCh37.p13	PATCHES	First Pass	NW_003315925.1	Chr9\|NW_00 3315925.1	46,543	46,607

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17444588	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17444588	Submitted genomic		NC_000009.12:g.133 220597_133220661de l	GRCh38 (hg38)		NC_000009.12	Chr9	133,220,597	133,220,661
nssv17444588	Remapped	Perfect	NW_003315925.1:g.4 6543_46607del	GRCh37.p13	First Pass	NW_003315925.1	Chr9\|NW_00 3315925.1	46,543	46,607
nssv17444588	Remapped	Perfect	NC_000009.11:g.136 095984_136096048de l	GRCh37.p13	Second Pass	NC_000009.11	Chr9	136,095,984	136,096,048

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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