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dbVar

Database of genomic structural variation

nsv5923882

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:23,351

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 147 SVs from 40 studies. See in: genome view

Submitted genomic34,117,308-34,140,658

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5923882	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000011.10	Chr11	34,117,308	34,140,658
nsv5923882	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000011.9	Chr11	34,138,855	34,162,205

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17350400	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17350400	Submitted genomic		NC_000011.10:g.341 17308_34140658del	GRCh38 (hg38)		NC_000011.10	Chr11	34,117,308	34,140,658
nssv17350400	Remapped	Perfect	NC_000011.9:g.3413 8855_34162205del	GRCh37.p13	First Pass	NC_000011.9	Chr11	34,138,855	34,162,205

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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