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dbVar

Database of genomic structural variation

nsv5927952

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:106

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 169 SVs from 54 studies. See in: genome view

Submitted genomic52,445,716-52,445,821

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5927952	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000019.10	Chr19	52,445,716	52,445,821
nsv5927952	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000019.9	Chr19	52,948,969	52,949,074

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17408099	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17408099	Submitted genomic		NC_000019.10:g.524 45716_52445821del	GRCh38 (hg38)		NC_000019.10	Chr19	52,445,716	52,445,821
nssv17408099	Remapped	Perfect	NC_000019.9:g.5294 8969_52949074del	GRCh37.p13	First Pass	NC_000019.9	Chr19	52,948,969	52,949,074

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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