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dbVar

Database of genomic structural variation

nsv5929315

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:534

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 126 SVs from 32 studies. See in: genome view

Submitted genomic52,345,895-52,346,428

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5929315	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000019.10	Chr19	52,345,895	52,346,428
nsv5929315	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000019.9	Chr19	52,849,148	52,849,681

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17393722	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17393722	Submitted genomic		NC_000019.10:g.523 45895_52346428del	GRCh38 (hg38)		NC_000019.10	Chr19	52,345,895	52,346,428
nssv17393722	Remapped	Perfect	NC_000019.9:g.5284 9148_52849681del	GRCh37.p13	First Pass	NC_000019.9	Chr19	52,849,148	52,849,681

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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