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dbVar

Database of genomic structural variation

nsv5929787

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:318

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 170 SVs from 47 studies. See in: genome view

Submitted genomic56,600,176-56,600,493

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5929787	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000019.10	Chr19	56,600,176	56,600,493
nsv5929787	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000019.9	Chr19	57,111,544	57,111,861

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17403213	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17403213	Submitted genomic		NC_000019.10:g.566 00176_56600493del	GRCh38 (hg38)		NC_000019.10	Chr19	56,600,176	56,600,493
nssv17403213	Remapped	Perfect	NC_000019.9:g.5711 1544_57111861del	GRCh37.p13	First Pass	NC_000019.9	Chr19	57,111,544	57,111,861

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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