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dbVar

Database of genomic structural variation

nsv5933579

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:3,621,160

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 10683 SVs from 134 studies. See in: genome view

Submitted genomic16,936,959-20,558,118

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5933579	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000017.11	Chr17	16,936,959	20,558,118
nsv5933579	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000017.10	Chr17	16,840,273	20,461,431

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17387996	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17387996	Submitted genomic		NC_000017.11:g.169 36959_20558118del	GRCh38 (hg38)		NC_000017.11	Chr17	16,936,959	20,558,118
nssv17387996	Remapped	Perfect	NC_000017.10:g.168 40273_20461431del	GRCh37.p13	First Pass	NC_000017.10	Chr17	16,840,273	20,461,431

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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