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dbVar

Database of genomic structural variation

nsv5935617

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:88

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 187 SVs from 18 studies. See in: genome view

Submitted genomic26,233,705-26,233,792

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5935617	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000018.10	Chr18	26,233,705	26,233,792
nsv5935617	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000018.9	Chr18	23,813,669	23,813,756

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17379087	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17379087	Submitted genomic		NC_000018.10:g.262 33705_26233792del	GRCh38 (hg38)		NC_000018.10	Chr18	26,233,705	26,233,792
nssv17379087	Remapped	Perfect	NC_000018.9:g.2381 3669_23813756del	GRCh37.p13	First Pass	NC_000018.9	Chr18	23,813,669	23,813,756

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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