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dbVar

Database of genomic structural variation

nsv5935857

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:7,348

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 180 SVs from 43 studies. See in: genome view

Submitted genomic55,709,313-55,716,660

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5935857	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000019.10	Chr19	55,709,313	55,716,660
nsv5935857	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000019.9	Chr19	56,220,679	56,228,026

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17406750	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17406750	Submitted genomic		NC_000019.10:g.557 09313_55716660del	GRCh38 (hg38)		NC_000019.10	Chr19	55,709,313	55,716,660
nssv17406750	Remapped	Perfect	NC_000019.9:g.5622 0679_56228026del	GRCh37.p13	First Pass	NC_000019.9	Chr19	56,220,679	56,228,026

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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