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dbVar

Database of genomic structural variation

nsv5938051

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:57

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 167 SVs from 22 studies. See in: genome view

Submitted genomic21,515,990-21,516,046

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5938051	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000018.10	Chr18	21,515,990	21,516,046
nsv5938051	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000018.9	Chr18	19,095,951	19,096,007

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17377953	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17377953	Submitted genomic		NC_000018.10:g.215 15990_21516046del	GRCh38 (hg38)		NC_000018.10	Chr18	21,515,990	21,516,046
nssv17377953	Remapped	Perfect	NC_000018.9:g.1909 5951_19096007del	GRCh37.p13	First Pass	NC_000018.9	Chr18	19,095,951	19,096,007

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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