Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv5939158

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:388,675

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1441 SVs from 81 studies. See in: genome view

Submitted genomic29,550,379-29,939,053

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5939158	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000018.10	Chr18	29,550,379	29,939,053
nsv5939158	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000018.9	Chr18	27,130,344	27,519,018

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17382116	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17382116	Submitted genomic		NC_000018.10:g.295 50379_29939053del	GRCh38 (hg38)		NC_000018.10	Chr18	29,550,379	29,939,053
nssv17382116	Remapped	Perfect	NC_000018.9:g.2713 0344_27519018del	GRCh37.p13	First Pass	NC_000018.9	Chr18	27,130,344	27,519,018

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

You are here: NCBI