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dbVar

Database of genomic structural variation

nsv5941538

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:87

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 219 SVs from 39 studies. See in: genome view

Submitted genomic82,598,065-82,598,151

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5941538	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000017.11	Chr17	82,598,065	82,598,151
nsv5941538	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000017.10	Chr17	80,555,941	80,556,027

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17380455	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17380455	Submitted genomic		NC_000017.11:g.825 98065_82598151del	GRCh38 (hg38)		NC_000017.11	Chr17	82,598,065	82,598,151
nssv17380455	Remapped	Perfect	NC_000017.10:g.805 55941_80556027del	GRCh37.p13	First Pass	NC_000017.10	Chr17	80,555,941	80,556,027

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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