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dbVar

Database of genomic structural variation

nsv5942541

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:99

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 365 SVs from 56 studies. See in: genome view

Submitted genomic99,798,371-99,798,469

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5942541	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000015.10	Chr15	99,798,371	99,798,469
nsv5942541	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000015.9	Chr15	100,338,576	100,338,674

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17378595	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17378595	Submitted genomic		NC_000015.10:g.997 98371_99798469del	GRCh38 (hg38)		NC_000015.10	Chr15	99,798,371	99,798,469
nssv17378595	Remapped	Perfect	NC_000015.9:g.1003 38576_100338674del	GRCh37.p13	First Pass	NC_000015.9	Chr15	100,338,576	100,338,674

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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