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dbVar

Database of genomic structural variation

nsv5945147

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:134

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 165 SVs from 18 studies. See in: genome view

Submitted genomic21,463,306-21,463,439

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5945147	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000018.10	Chr18	21,463,306	21,463,439
nsv5945147	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000018.9	Chr18	19,043,267	19,043,400

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17386596	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17386596	Submitted genomic		NC_000018.10:g.214 63306_21463439del	GRCh38 (hg38)		NC_000018.10	Chr18	21,463,306	21,463,439
nssv17386596	Remapped	Perfect	NC_000018.9:g.1904 3267_19043400del	GRCh37.p13	First Pass	NC_000018.9	Chr18	19,043,267	19,043,400

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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