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dbVar

Database of genomic structural variation

nsv5946813

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:4,749

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 157 SVs from 37 studies. See in: genome view

Submitted genomic29,341,196-29,345,944

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5946813	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000013.11	Chr13	29,341,196	29,345,944
nsv5946813	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000013.10	Chr13	29,915,333	29,920,081

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17373390	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17373390	Submitted genomic		NC_000013.11:g.293 41196_29345944del	GRCh38 (hg38)		NC_000013.11	Chr13	29,341,196	29,345,944
nssv17373390	Remapped	Perfect	NC_000013.10:g.299 15333_29920081del	GRCh37.p13	First Pass	NC_000013.10	Chr13	29,915,333	29,920,081

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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